Changing the Cultivability of Soil Bacteria with the Addition of Growth Factors
Abstract
Introduction. Currently, approximately 1% of all known bacteria can be cultivated under laboratory conditions. The inability to obtain pure cultures of many microorganisms creates significant challenges for fundamental and applied research. This is particularly true for soil bacteria because of the high diversity of prokaryotic species in this environment. These findings highlight the need to develop methods for cultivating new strains, including the development of new culture media and modification of existing media by adding growth factors. The aim of this study is to investigate the possibility of increasing bacterial cultivability by adding growth factors such as heme and potassium humate to the R2A medium, as well as replacing agar-agar with gellan gum.
Materials and Methods. The study involved soils from anthropogenic landscapes in the Rostov Region. The effects of growth factors on the cultivability of soil bacteria were investigated by counting the total number of colonies on a universal culture medium and separately recording fast-growing and slow-growing strains. The data obtained were processed using Statistica.
Research Results. According to the results, potassium humate has a stimulating effect at low concentrations and an inhibitory effect at high concentrations. Heme increases the growth rate of fast-growing strains while simultaneously inhibiting slow-growing bacteria. Gellan gum improved the cultivability of slow-growing strains in one experimental variant.
Discussion and Conclusion. Given the ambiguous results regarding the effects of gellan gum and heme, further experiments with these components are needed. However, potassium humate stimulated bacterial growth. Based on these data, it can be concluded that the addition of growth factors may enable the cultivation of previously uncultivated soil bacteria. Thus, this topic is a promising area in experimental microbiology and requires further similar research.
About the Authors
F. Yu. TokarevaRussian Federation
Flavia Yu. Tokareva, Master's student in the Department of Biochemistry and Microbiology of the Academy of Biology and Medicine
344090, Rostov-on-Don, Stachki Ave., 194/1
A. V. Gorovtsov
Russian Federation
Andrey V. Gorovtsov, PhD in Biology, Associate Professor, Acting Head of the Department of Biochemistry and Microbiology at the Academy of Biology and Medicine
344090, Rostov-on-Don, Stachki Ave., 194/1
References
1. Ravin NV, Mardanov AV, Skryabin KG. Metagenomics as a Tool for Studying "Uncultivated" Microorganisms. Genetics. 2015;51(5):519. (In Russ.) https://doi.org/10.7868/S0016675815050069
2. Verevkina MN. Features of the selection of nutrient media for microorganisms In: Proceedings of the 19th International Scientific and Methodological Conference on Animal Pathological Anatomy “Current Issues in Pathology, Morphology and Therapy of Animals”, Stavropol, September 20–22, 2017. Stavropol: AGRUS Publishing House; 2018. P. 400–402. (In Russ.)
3. İzgördü ÖK, Darcan C, Kariptaş E. Overview of VBNC, a Survival Strategy for Microorganisms. 3 Biotech. 2022;12(11):307. https://doi.org/10.1007/s13205-022-03371-4
4. Pishchik VN, Boytsova LV, Vorobyov NI. The Influence of Humic Substances on Plants and Rhizosphere Microorganisms in Plant-Microbial Systems. Agrochemistry. 2019;(3):85–95. (In Russ.) https://doi.org/10.1134/S0002188119030116
5. Gorovtsov AV, Bezuglova OS, Polienko EA, Popov AE. The Influence of Humic Substances on the Microbiological Activity of the Soil Under Fruit Crops. Living and Bio-Inert Systems. 2016;(18):2. (In Russ.) URL: https://jbks.ru/archive/issue-18/article-2 (accessed: 14.05.2026).
6. Gataullina AR, Kanarskaya ZA, Kanarsky AV. The use of peat humic substances in a nutrient medium for yeast cultivation In: Proceedings of the XIII International Scientific and Practical Conference “Product, Technology and Education Quality”, Magnitogorsk, March 30, 2018. Magnitogorsk: Nosov Magnitogorsk State Technical University. 2018. P. 120–124. (In Russ.)
7. Kim D., Kim D, Park HJ, Sul WJ, Park H. Transcriptome Analysis of Pseudomonas sp. From Subarctic Tundra Soil: Pathway Description and Gene Discovery for Humic Acids Degradation. Folia Microbiologica. 2018;63:315–323. https://doi.org/10.1007/s12223-017-0573-0
8. Fyrestam J, Östman C. Determination of Heme in Microorganisms Using HPLC MS/MS and Cobalt (III) Protoporphyrin IX Inhibition of Heme Acquisition. In 44 Escherichia Coli. Analytical and Bioanalytical Chemistry. 2017;409(30):6999–7010. https://doi.org/10.1007/s00216-017-0610-5
9. Rygaard AM, Thøgersen MS, Nielsen KF, Gram L, Bentzon-Tilia M. Effects of Gelling Agent and Extracellular Signaling Molecules on the Culturability of Marine Bacteria. Applied and Environmental Microbiology. 2017;83(9):e00243–17 https://doi.org/10.1128/AEM.00243-17
10. Liu YF, Yang L, He QP, Xu YL, Zhu YT, Mi YL. Gelling and Reducing Agents are Potential Carbon and Energy Sources in Culturing of Anaerobic Microorganisms. Applied and Environmental Microbiology. 2025;91(3):e0227624
Review
For citations:
Tokareva F.Yu., Gorovtsov A.V. Changing the Cultivability of Soil Bacteria with the Addition of Growth Factors. Food Safety and Bioeconomy. 2026;1(1):33-41. (In Russ.)
JATS XML

